本文整理了Java中org.molgenis.data.Entity.get()方法的一些代码示例，展示了Entity.get()的具体用法。这些代码示例主要来源于Github/Stackoverflow/Maven等平台，是从一些精选项目中提取出来的代码，具有较强的参考意义，能在一定程度帮忙到你。Entity.get()方法的具体详情如下：
包路径：org.molgenis.data.Entity
类名称：Entity
方法名：get

Entity.get介绍

暂无

代码示例

代码示例来源：origin: org.molgenis/molgenis-data-annotators

@Override
  public Query<Entity> createQuery(Entity entity)
  {
    Object value = entity.get(EffectsMetaData.GENE_NAME);
    return EQ(EffectsMetaData.GENE_NAME, value);
  }
}

代码示例来源：origin: org.molgenis/molgenis-data-annotators

private String concatAttributeNameValue(Attribute attribute)
  {
    String value;
    if (attribute.getName().equals(VARIANT))
    {
      value = getFailedEntity().getEntity(VARIANT).getIdValue().toString();
    }
    else
    {
      value = getFailedEntity().get(attribute.getName()).toString();
    }
    return attribute.getName() + "=" + value;
  }
}

代码示例来源：origin: org.molgenis/molgenis-data-annotators

private Stream<Entity> createVariantEffectStructureForSingleEntity(Attribute attributeToParse,
    ArrayList<Attribute> effectFieldAttributeList, EntityType effectsEntityType, Entity vcfInputEntity,
    EntityType variantEntityType)
{
  List<Entity> results = new ArrayList<>();
  Entity variantEntity = new DynamicEntity(variantEntityType);
  for (String attr : variantEntity.getAttributeNames())
  {
    if (vcfInputEntity.getEntityType().getAttribute(attr) != null)
    {
      variantEntity.set(attr, vcfInputEntity.get(attr));
    }
  }
  List<Entity> result = createEffectsEntitiesForSingleVariant(effectsEntityType, effectFieldAttributeList,
      vcfInputEntity.getString(attributeToParse.getName()), variantEntity).collect(Collectors.toList());
  results.addAll(result);
  return results.stream();
}

代码示例来源：origin: org.molgenis/molgenis-jobs

private void setFailed(Entity jobExecutionEntity) {
 jobExecutionEntity.set(STATUS, FAILED.toString());
 jobExecutionEntity.set(PROGRESS_MESSAGE, "Application terminated unexpectedly");
 StringBuilder log = new StringBuilder();
 if (!isEmpty(jobExecutionEntity.get(LOG))) {
  log.append(jobExecutionEntity.get(LOG));
  log.append('\n');
 }
 log.append("FAILED - Application terminated unexpectedly");
 String abbreviatedLog =
   abbreviateMiddle(log.toString(), "...\n" + TRUNCATION_BANNER + "\n...", MAX_LOG_LENGTH);
 jobExecutionEntity.set(LOG, abbreviatedLog);
 dataService.update(jobExecutionEntity.getEntityType().getId(), jobExecutionEntity);
}

代码示例来源：origin: org.molgenis/molgenis-data-validation

private void validateEntityValueRequired(Entity entity, ValidationResource validationResource) {
 validationResource
   .getRequiredValueAttrs()
   .forEach(
     nonNillableAttr -> {
      Object value = entity.get(nonNillableAttr.getName());
      if (value == null
        || (isMultipleReferenceType(nonNillableAttr)
          && !entity.getEntities(nonNillableAttr.getName()).iterator().hasNext())) {
       ConstraintViolation constraintViolation =
         new ConstraintViolation(
           format(
             "The attribute '%s' of entity '%s' can not be null.",
             nonNillableAttr.getName(), getName()),
           (long) validationResource.getRow());
       validationResource.addViolation(constraintViolation);
      }
     });
}

代码示例来源：origin: org.molgenis/molgenis-data-annotators

/**
 * Get the resource attribute value for one of this annotator's output attributes.
 *
 * @param attr   the name of the output attribute
 * @param entity the current entity
 * @return the value of the attribute to copy from the resource entity
 */
protected Object getResourceAttributeValue(Attribute attr, Entity entity)
{
  return entity.get(attr.getName());
}

代码示例来源：origin: org.molgenis/molgenis-settings

@Override
public Object get(String attributeName) {
 return getEntity().get(attributeName);
}

代码示例来源：origin: org.molgenis/molgenis-data-annotators

@Override
  protected Object getResourceAttributeValue(Attribute attr, Entity entityType)
  {
    String attrName = THOUSAND_GENOME_AF.equals(
        attr.getName()) ? THOUSAND_GENOME_AF_RESOURCE_ATTRIBUTE_NAME : attr.getName();
    return entityType.get(attrName);
  }
};

代码示例来源：origin: org.molgenis/molgenis-data-annotators

private Map<Object, Entity> getIndex()
  {
    if (index.isEmpty())
    {
      forEach(e ->
      {
        Object key = e.get(sourceAttributeName);
        if (key == null) throw new MolgenisDataException(
            "Missing value for attribute [" + sourceAttributeName + "] in entity [" + e + "]");
        index.put(key, e);
      });
    }

    return index;
  }
}

代码示例来源：origin: org.molgenis/molgenis-data-postgresql

static Map<String, Object> createJunctionTableRowData(
  int seqNr, Attribute idAttr, Entity refEntity, Attribute junctionTableAttr, Entity entity) {
 Map<String, Object> mref = Maps.newHashMapWithExpectedSize(3);
 mref.put(getJunctionTableOrderColumnName(), seqNr);
 mref.put(idAttr.getName(), entity.get(idAttr.getName()));
 mref.put(junctionTableAttr.getName(), refEntity);
 return mref;
}

代码示例来源：origin: org.molgenis/molgenis-data-annotators

@Override
  protected Object getResourceAttributeValue(Attribute attr, Entity sourceEntity)
  {
    String attrName = EXAC_AF.equals(attr.getName()) ? EXAC_AF_ResourceAttributeName : EXAC_AC_HOM.equals(
        attr.getName()) ? EXAC_AC_HOM_ResourceAttributeName : EXAC_AC_HET.equals(
        attr.getName()) ? EXAC_AC_HET_ResourceAttributeName : attr.getName();
    return sourceEntity.get(attrName);
  }
};

代码示例来源：origin: org.molgenis/molgenis-data-annotators

private boolean refMatches(Entity resourceEntity)
{
  return resourceEntity.get(vcfAttributes.getRefAttribute().getName())
             .equals(vcfAttributes.getRefAttribute().getName());
}

代码示例来源：origin: org.molgenis/molgenis-data-annotators

@Override
public Query<Entity> createQuery(Entity entity)
{
  Object value = entity.get(attribute.getName());
  return EQ(attribute.getName(), value);
}

代码示例来源：origin: org.molgenis/molgenis-data-merge

/**
 * create a new entity based on the merged entity metadata
 */
private AbstractEntity createMergedEntity(List<AttributeMetaData> commonAttributes, Entity entity)
{
  AbstractEntity mergedEntity = new MapEntity(ID);
  mergedEntity.set(ID, UUID.randomUUID().toString());
  for (AttributeMetaData attributeMetaData : commonAttributes)
  {
    mergedEntity.set(attributeMetaData.getName(), entity.get(attributeMetaData.getName()));
  }
  return mergedEntity;
}

代码示例来源：origin: org.molgenis/molgenis-data-csv

@Override
public void add(Entity entity) {
 if (cachedAttributeNames == null)
  throw new MolgenisDataException("No attribute names defined call writeAttributeNames first");
 int i = 0;
 String[] values = new String[cachedAttributeNames.size()];
 for (String colName : cachedAttributeNames) {
  values[i++] = toValue(entity.get(colName));
 }
 csvWriter.writeNext(values);
 if (csvWriter.checkError())
  throw new MolgenisDataException("An exception occured writing the csv file");
}

代码示例来源：origin: org.molgenis/molgenis-annotators-cmd

private boolean isEmptyEffectEntity(Entity effectEntity)
  {
    boolean isEmpty = true;
    for (Attribute effectAttribute : effectEntityType.getAtomicAttributes())
    {
      //was an empty effect entity created? this entity can be recoginized by the fact that it only has a filled Id attribute and Variant xref
      if (effectAttribute.getName().equals(effectEntityType.getIdAttribute().getName()) || effectAttribute
          .getName().equals(VARIANT))
      {
      }
      else if (effectEntity.get(effectAttribute.getName()) != null)
      {
        isEmpty = false;
        break;
      }
    }
    return isEmpty;
  }
};

代码示例来源：origin: org.molgenis/molgenis-fair

private void addStatementsForAttributeTags(
  Entity objectEntity, Model model, Resource subject, EntityType entityType) {
 for (Attribute objectAttribute : entityType.getAtomicAttributes()) {
  Object value = objectEntity.get(objectAttribute.getName());
  if (value == null) {
   continue;
  }
  for (LabeledResource tag :
    tagService
      .getTagsForAttribute(entityType, objectAttribute)
      .get(Relation.isAssociatedWith)) {
   IRI predicate = valueFactory.createIRI(tag.getIri());
   addRelationForAttribute(model, subject, predicate, objectEntity, objectAttribute);
  }
 }
}

代码示例来源：origin: org.molgenis/molgenis-data-annotators

@Override
protected Object getResourceAttributeValue(Attribute attr, Entity sourceEntity)
{
  if (attr.getName().equals(GENERALIZED_INHERITANCE.getAttributeName()))
  {
    return getGeneralizedInheritance(sourceEntity);
  }
  String sourceName = CGDAttributeName.getCgdName(attr.getName());
  if (sourceName == null) throw new MolgenisDataException("Unknown attribute [" + attr.getName() + "]");
  return sourceEntity.get(sourceName);
}

代码示例来源：origin: org.molgenis/molgenis-data-validation

private static ConstraintViolation createConstraintViolation(
  Entity entity, Attribute attribute, EntityType entityType) {
 String message =
   format(
     "Invalid %s value '%s' for attribute '%s' of entity '%s'.",
     attribute.getDataType().toString().toLowerCase(),
     entity.get(attribute.getName()),
     attribute.getLabel(),
     entityType.getId());
 Range range = attribute.getRange();
 if (range != null) {
  message += format("Value must be between %d and %d", range.getMin(), range.getMax());
 }
 Long maxLength = attribute.getDataType().getMaxLength();
 if (maxLength != null) {
  message += format("Value must be less than or equal to %d characters", maxLength);
 }
 return new ConstraintViolation(message);
}

代码示例来源：origin: org.molgenis/molgenis-data-merge

/**
 * check if an entity for the common attributes already exists and if so, return it
 */
private Entity getMergedEntity(Repository repository, List<AttributeMetaData> commonAttributes, Entity entity)
{
  Query findMergedEntityQuery = new QueryImpl();
  for (AttributeMetaData attributeMetaData : commonAttributes)
  {
    if (!findMergedEntityQuery.getRules().isEmpty()) findMergedEntityQuery = findMergedEntityQuery.and();
    findMergedEntityQuery = findMergedEntityQuery.eq(attributeMetaData.getName(),
        entity.get(attributeMetaData.getName()));
  }
  Entity result = repository.findOne(findMergedEntityQuery);
  return result;
}