本文整理了Java中org.opencb.opencga.storage.core.variant.adaptors.VariantQueryUtils.validParams()方法的一些代码示例，展示了VariantQueryUtils.validParams()的具体用法。这些代码示例主要来源于Github/Stackoverflow/Maven等平台，是从一些精选项目中提取出来的代码，具有较强的参考意义，能在一定程度帮忙到你。VariantQueryUtils.validParams()方法的具体详情如下：
包路径：org.opencb.opencga.storage.core.variant.adaptors.VariantQueryUtils
类名称：VariantQueryUtils
方法名：validParams

VariantQueryUtils.validParams介绍

暂无

代码示例

代码示例来源：origin: opencb/opencga

public static Collection<VariantQueryParam> coveredParams(Query query) {
  Set<VariantQueryParam> params = validParams(query);
  return coveredParams(params);
}

代码示例来源：origin: opencb/opencga

public static Collection<VariantQueryParam> uncoveredParams(Query query) {
  Set<VariantQueryParam> params = validParams(query);
  return uncoveredParams(params);
}

代码示例来源：origin: opencb/opencga

public static void validateAnnotationQuery(Query query) {
    if (query == null) {
      return;
    }
    List<VariantQueryParam> acceptedParams = Arrays.asList(ID, REGION);
    List<VariantQueryParam> ignoredParams = Arrays.asList(INCLUDE_STUDY, INCLUDE_SAMPLE, INCLUDE_FILE);
    Set<VariantQueryParam> queryParams = VariantQueryUtils.validParams(query);
    queryParams.removeAll(acceptedParams);
    queryParams.removeAll(ignoredParams);
    if (!queryParams.isEmpty()) {
//            System.out.println("query.toJson() = " + query.toJson());
      throw VariantQueryException.unsupportedVariantQueryFilters(queryParams,
          "Accepted params when querying annotation are : " + acceptedParams.stream()
              .map(QueryParam::key)
              .collect(Collectors.toList()));
    }
    List<String> invalidValues = new LinkedList<>();
    for (String s : query.getAsStringList(ID.key())) {
      if (!VariantQueryUtils.isVariantId(s)) {
        invalidValues.add(s);
        break;
      }
    }
    if (!invalidValues.isEmpty()) {
      throw VariantQueryException.malformedParam(ID, invalidValues.toString(),
          "Only variants supported: chrom:start:ref:alt");
    }
  }

代码示例来源：origin: opencb/opencga

public static Set<String> unsupportedParamsFromQuery(Query query) {
  Set<VariantQueryParam> otherParams = validParams(query);
  otherParams.removeAll(SUPPORTED_QUERY_PARAMS);
  Set<String> messages = new HashSet<>();

代码示例来源：origin: opencb/opencga

Set<VariantQueryParam> queryParams = VariantQueryUtils.validParams(query);
queryParams.removeAll(MODIFIER_QUERY_PARAMS);